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Global mapping of ZBTB7A transcription factor binding sites in HepG2 cells

Abstract

ZBTB7A is a known proto-oncogene that is implicated in carcinogenesis and cell differentiation and development. Fully understanding the function of ZBTB7A in cellular processes could provide useful strategies for cancer treatment and development-associated disease therapy. Here, global mapping of ZBTB7A transcription factor binding sites was developed by utilizing microarray technology in HepG2 cells. The data obtained from the microarrays was further validated via chromatin immunoprecipitation-PCR (ChIP-PCR) and real time-PCR, and it was revealed that ZBTB7A may be one of the regulators of neural development. ZBTB7A target signal pathways were identified in signal pathway and GO (Gene Ontology) analyses. This is the first report on the global mapping of ZBTB7A downstream direct targets, and these findings will be useful in understanding the roles of ZBTB7A in cellular processes.

Abbreviations

ChIP:

chromatin immunoprecipitation

FASN:

synthase gene

GO:

gene ontology

KEGG:

Kyoto Encyclopedia of Genes and Genomes

PMSF:

phenylmethylsulfonyl fluoride

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Correspondence to Yuyang Jiang.

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Zu, X., Yu, L., Sun, Y. et al. Global mapping of ZBTB7A transcription factor binding sites in HepG2 cells. Cell Mol Biol Lett 15, 260–271 (2010). https://doi.org/10.2478/s11658-010-0003-7

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  • DOI: https://doi.org/10.2478/s11658-010-0003-7

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