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Table 4 Delivery methods for transferring synthetic regulatory RNAs to bacteria

From: Natural antisense RNAs as mRNA regulatory elements in bacteria: a review on function and applications

Delivery methods

Traits

Biological methods

 Transduction

A specific DNA donor is required for DNA transfer to recipient bacteria

 Conjugation

Requiring physical contact of recipient and donor (host strain) with a conjugative plasmid or participation of a third bacterium with a helper plasmid

Not useful for large-scale delivery applications

 Gene transformation

Limited to a few naturally competent groups

Physical methods

 Electroporation

Highly efficient but requires low ionic strength medium and high voltage

Not useful for large-scale delivery applications

 Laser irradiation

Employs a laser to change cell permeability to allow transferal; requires physical contact of laser and cells

 Ultrasound DNA delivery (UDD); Sonoporation

Appropriate approach for plasmid or DNA fragment transferal to eukaryotic cells (e.g., gene therapy)

 Heat shock transfer

Mostly used for E. coli (in parallel with the calcium phosphate method)

Chemical methods

 Protein & Peptides

Introduced in the late 1950s, this technique originally used high salt concentration and polycationic proteins to enhance nucleic acid entry into the cell.

Now cationic peptides are using to enhance nucleic acid delivery. Cationic peptides have been found useful for enhancing cellular uptake and/or cell targeting oligonucleotide analogs. These peptides are synthetically conjugated, used as non-covalent complexes, or used in combination with polymer formulation techniques

 Calcium phosphate

Simple, effective and still widely used for nucleic acid delivery

 Artificial lipids

DNA has been successfully complexed with cationic, anionic and neutral liposomes. These complexes can be handled easily, but lipid-based systems generally have significant drawbacks, including the lack of targeting and variations arising during fabrication

 Naonparticles

Using carbon nanotubes, nucleic acid is delivered into cells. Magneto-transformation has also been used for nucleic acid transfer, but in that method, pulsed magnetic fields assisted the delivery of DNA using magnetic nanoparticles.