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Table 1 The common genes altered in both the GSE26910 and GSE10797 datasets

From: Systematic identification of the key candidate genes in breast cancer stroma

Overlapping gene logFC (GSE26910) logFC (GSE10797) Overlapping gene logFC (GSE26910) logFC (GSE10797)
FOSB −3.29 −1.57 CNTRL − 0.74 − 0.66
CLDN5 −3.27 − 0.94 AV720803 − 0.74 − 1.31
IL33 −3.14 −1.06 DYNC2LI1 −0.72 − 0.71
CD36 −3.02 −0.82 CITED1 −0.71 −1.70
CFD −3.02 −1.87 CD59 −0.69 −1.25
TGFBR3 −2.99 −1.22 TSPAN14 −0.65 −0.88
SEMA3G −2.92 −0.95 SPTBN1 −0.65 − 0.34
FAM189A2 −2.83 −1.57 CNKSR2 −0.65 −1.04
ZBTB16 −2.80 −0.51 SEPP1 − 0.65 −1.16
RELN −2.72 −1.29 IFNGR1 − 0.61 −0.75
APOD −2.67 −2.04 MBNL2 −0.60 − 0.66
PPL −2.56 −1.39 GLTSCR1L −0.59 − 0.95
DLK1 −2.52 −0.56 EXOSC10 −0.59 −1.55
SYNM −2.43 −2.95 DST −0.59 − 0.87
FOS −2.40 −0.91 U2SURP −0.55 −1.09
SPRY2 −2.17 −1.40 SNORD23 −0.55 −1.32
ITIH5 −2.09 −0.87 MCCC1 −0.52 −1.02
AV764378 −1.96 − 1.38 ZFP36L2 −0.49 −0.42
TNXB −1.74 −0.60 CERS1 −0.44 −0.68
JUN −1.72 −2.08 TLE4 −0.43 −0.67
AMOTL2 −1.71 −0.61 GABARAPL3 −0.43 − 0.96
ABCA8 −1.68 −2.42 NCALD −0.43 −1.52
DUSP6 −1.61 −1.06 RPL7 −0.40 −0.55
LHFP −1.50 −1.93 GSN −0.39 −0.52
PTH2R −1.49 −0.87 EZH1 −0.37 −0.68
CLEC1A −1.42 −0.82 COQ8A −0.37 −1.35
CXCL1 −1.39 −0.79 RPS6 −0.37 −0.66
SFRP1 −1.37 −1.87 ERCC5 −0.36 −1.74
EGR1 −1.34 −0.60 TJP2 −0.35 −1.16
RGL1 −1.33 −0.97 SRSF4 −0.34 −0.80
FGF13 −1.28 −0.99 SUMO3 0.43 0.55
HMGN3 −1.27 −1.77 BASP1 0.50 1.01
CASQ2 −1.24 −0.50 COMMD10 0.50 1.11
COLGALT2 −1.16 −0.75 FAM89B 0.52 0.55
ACACB −1.14 −1.22 HILPDA 0.59 0.83
OLFML2A −1.14 −0.46 CAPZB 0.60 0.40
ENOSF1 −1.12 −0.88 FCGR2A 0.63 1.59
ABCA5 −1.10 −1.23 LEF1 0.64 0.80
GHR −1.09 −1.47 PSMB5 0.64 1.16
ITGA6 −1.08 −0.65 CERS6 0.67 0.92
ADRB2 −1.08 −2.27 CALU 0.75 0.76
VPS37B −1.05 −0.59 MAGED1 0.76 0.92
ATF3 −1.05 −1.43 TLL2 0.77 0.83
CCNL1 −1.04 −0.94 COL1A1 0.78 1.30
IGFBP6 −1.01 −1.28 SPARC 0.79 1.58
IER2 −1.00 −2.04 S100P 0.91 2.87
ERV3–2 −1.00 −1.16 TNFRSF12A 1.03 0.56
ECHDC2 −0.98 −1.90 THY1 1.07 0.61
MAOA −0.97 −0.44 STAT1 1.09 0.66
GNAZ −0.95 −0.91 RAI14 1.16 0.90
CBX7 −0.95 −0.98 COL5A2 1.18 1.76
MID1 −0.93 −0.75 NID2 1.20 1.28
ANXA1 −0.93 −2.12 SPON1 1.25 1.20
PDE9A −0.92 −1.38 POSTN 1.43 1.62
MAFF −0.91 −1.59 VCAN 1.45 0.96
TLE2 −0.89 −0.88 COL5A1 1.55 1.65
SH3BP5 −0.89 −1.00 FN1 1.56 2.56
ICAM2 −0.89 −0.84 BGN 1.61 1.81
STAB2 −0.87 −0.46 AEBP1 1.64 1.58
MAP3K8 −0.87 −0.75 PLXDC2 1.67 1.10
CIRBP −0.85 −1.08 FAP 1.77 1.11
TPD52L1 −0.85 −0.99 LRRC15 1.78 1.89
NFIB −0.84 −1.11 SNX10 1.84 1.70
HDAC4 −0.84 −1.46 SMYD3 1.91 0.52
SESN1 −0.83 −0.40 ASPN 1.94 3.02
PER2 −0.82 −1.08 CDH11 1.99 0.84
LOC101929115 −0.81 −1.43 IFI30 2.23 0.62
HMGCR −0.80 −0.57 GREM1 2.41 1.01
AUH −0.79 −1.11 MMP1 3.05 1.84
C1orf115 −0.79 −0.48 SULF1 3.12 1.66
MIR4738 −0.79 −1.29 MATN3 3.22 1.59
CXCL2 −0.77 −2.91 COL11A1 5.56 2.33
CYP21A1P −0.77 −2.03 COL10A1 5.60 1.52