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Table 2 Identification of DEGs involved in endochondral ossification and bone formation

From: Comparative transcriptome analysis of the main beam and brow tine of sika deer antler provides insights into the molecular control of rapid antler growth

Gene name Gene expression level (FPKM) Fold change FDR
Brow tines Main beams log2 FPKM (main beams/brow tines)
Collagen alpha-1(X) chain (Col10a1) 1008.17 231.43 −2.12 0
Osteopontin (Spp1) 743.90 112.04 −2.73 0
Bone sialoprotein 2 (Ibsp) 495.27 112.68 −2.14 0
Tartrate-resistant acid phosphatase type 5 (Acp5) 316.17 22.63 −3.80 0
Osteocalcin (Ocn) 123.45 28.47 −2.12 3.24E-182
Protein S100-A9 (S100a9) 95.16 15.14 −2.65 8.41E-284
Periostin (Postn) 34.67 3.13 −3.47 3.76E-222
Matrix metalloproteinase-9 (Mmp9) 24.65 4.94 −2.32 1.43E-206
Ras-related C3 botulinum toxin substrate 2(Rac2) 17.91 3.87 −2.21 1.53E-136
C-type lectin domain family 3 member A (Clec3a) 17.57 2.49 −2.82 1.21E-148
Metalloendopeptidase homolog PEX (Phex) 12.26 1.37 −3.16 2.49E-43
Dentin matrix acidic phosphoprotein 1 (Dmp1) 10.88 0.10 −6.80 6.58E-185
Sorting nexin-10 (Snx10) 10.70 2.27 −2.23 5.56E-45
Cytokine-like protein 1 (Cytl1) 8.39 1.63 −2.36 5.85E-30
Megakaryocyte-associated tyrosine-protein kinase (Matk) 7.78 0.88 −3.14 9.94E-23
Disintegrin and metalloproteinase domain-containing protein 8 (Adam8) 5.51 1.17 −2.24 7.38E-17
Osteoclast-associated immunoglobulin-like receptor (Oscar) 4.21 0.61 −2.80 6.95E-12